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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
125
total RNA-seq
2
pCHi-C
2
single cell RNA-seq
1
DNase-seq
Assay category
127
Transcription
1
DNA accessibility
Date released
79
May, 2021
22
February, 2021
15
February, 2018
7
August, 2021
4
March, 2020
2
December, 2019
October, 2019
1
August, 2017
Available data
287
bam
255
bigWig
141
fastq
130
bed narrowPeak
129
tsv
40
tagAlign
25
bed bed3+
15
bigBed narrowPeak
7
bed bedgraph
5
bed bed3
5
bedpe bed3+
3
txt
2
hic
2
ibed
1
bed broadPeak
1
bigBed broadPeak
Organism
130
Homo sapiens
Biosample type
1277
tissue
313
primary cell
173
cell line
130
in vitro differentiated cells
4
stem cell
Organ
6
connective tissue
6
embryo
2
epithelium
1
heart
Project
130
AMP
Genome assembly (visualization)
126
GRCh38
126
hg19
Lab
130
AMP-T2D consortium
Audit category:
88
inconsistent ontology term
2
audit script error
month_released!
October, 2019
BIOSAMPLE
ASSAY
130 results
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total RNA-seq
pCHi-C
single cell RNA-seq
DNase-seq
in vitro differentiated cells
cardiomyocytes
59
cardiac precursors (cardiac muscle cell)
18
induced pluripotent stem cell
9
neural progenitor cell
7
adipocyte
4
1
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