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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
1
DNase-seq
Assay category
20
DNA binding
1
DNA accessibility
Target of assay
13
histone
13
histone modification
8
broad histone mark
5
narrow histone mark
4
transcription factor
3
control
Date released
August, 2021
15
August, 2017
6
May, 2021
Available data
254
bam
237
bigWig
141
fastq
122
tsv
107
bed narrowPeak
23
bed bed3+
20
tagAlign
17
bigBed narrowPeak
7
bed bedgraph
7
bedpe bed3+
5
bed bed3
4
hic
3
txt
2
ibed
1
bed broadPeak
1
bigBed broadPeak
Organism
21
Homo sapiens
Biosample type
414
tissue
134
primary cell
68
cell line
21
in vitro differentiated cells
Organ
15
connective tissue
3
epithelium
3
pancreas
Project
21
AMP
Genome assembly (visualization)
6
GRCh38
6
hg19
Lab
21
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
month_released!
August, 2021
December, 2019
BIOSAMPLE
ASSAY
21 results
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ChIP-seq
DNase-seq
in vitro differentiated cells
adipocyte
14
1
cardiomyocytes
3
pancreatic PP cell
3
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