Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 127total RNA-seq
  • 2pCHi-C
  • 2single cell RNA-seq
Assay category
  • 129Transcription
Date released
  • 79May, 2021
  • 22February, 2021
  • 15February, 2018
  • 7August, 2021
  • 4March, 2020
  • 2December, 2019
  • 2October, 2019
Available data
  • 291bam
  • 259bigWig
  • 141fastq
  • 132bed narrowPeak
  • 131tsv
  • 40tagAlign
  • 25bed bed3+
  • 17bigBed narrowPeak
  • 7bed bedgraph
  • 7bedpe bed3+
  • 5bed bed3
  • 4hic
  • 3txt
  • 2ibed
  • 1bed broadPeak
  • 1bigBed broadPeak
Organism
  • 131Homo sapiens
Biosample type
  • 1076tissue
  • 270primary cell
  • 131in vitro differentiated cells
  • 119cell line
  • 4stem cell
Organ
  • 6embryo
  • 5connective tissue
  • 2epithelium
  • 1heart
Project
  • 131AMP
Genome assembly (visualization)
  • 127GRCh38
  • 127hg19
Lab
  • 131AMP-T2D consortium
Audit category:
  • 90inconsistent ontology term
  • 2audit script error
BIOSAMPLE
ASSAY

131 results

search-icontable-tab-icon
Clear Filters
total RNA-seq
pCHi-C
single cell RNA-seq
in vitro differentiated cells
cardiomyocytes59
cardiac precursors (cardiac muscle cell)19
induced pluripotent stem cell9
neural progenitor cell7
cardiomyocytes (cardiac muscle cell)312
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego