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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 48ChIP-seq
  • 4GRO-seq
Assay category
  • 48DNA binding
Target of assay
  • 24histone
  • 24histone modification
  • 16transcription factor
  • 13narrow histone mark
  • 11broad histone mark
  • 8control
  • 2RNA binding protein
  • 1chromatin remodeller
Date released
  • 43December, 2017
  • 5August, 2017
  • 4January, 2018
Available data
  • 52fastq
  • 48bam
  • 43bigWig
  • 34bed narrowPeak
  • 14bigBed narrowPeak
  • 12bed bed3+
Organism
  • 52Homo sapiens
Biosample type
  • 52in vitro differentiated cells
  • 48cell line
  • 47tissue
  • 37primary cell
  • 4stem cell
Organ
  • 19epithelium
  • 15liver
  • 14embryo
  • 5connective tissue
Project
  • 52AMP
Genome assembly (visualization)
  • 43GRCh38
  • 43hg19
  • 4hg18
Lab
  • 52AMP-T2D consortium
Audit category:
  • 4inconsistent ontology term
Audit category:
  • 6missing controlled_by
Audit category:
  • 9inconsistent control read length
BIOSAMPLE
ASSAY

52 results

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Clear Filters
ChIP-seq
GRO-seq
in vitro differentiated cells
hepatocyte15
pancreatic endoderm91
Posterior foregut51
definitive endodermal cell51
primitive gut cell51
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