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Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
120
ChIP-seq
15
total RNA-seq
4
GRO-seq
Assay category
120
DNA binding
15
Transcription
Target of assay
65
histone
65
histone modification
33
narrow histone mark
33
transcription factor
31
broad histone mark
22
control
6
RNA binding protein
3
chromatin remodeller
Date released
53
August, 2017
43
December, 2017
39
February, 2018
4
January, 2018
Available data
139
fastq
135
bam
116
bigWig
92
bed narrowPeak
19
bed bed3+
15
tsv
14
bigBed narrowPeak
Organism
139
Homo sapiens
Biosample type
324
cell line
284
primary cell
175
tissue
139
in vitro differentiated cells
4
stem cell
Organ
53
connective tissue
27
embryo
19
epithelium
15
liver
Project
139
AMP
Genome assembly (visualization)
117
GRCh38
117
hg19
4
hg18
Lab
139
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
6
missing controlled_by
Audit category:
17
inconsistent control read length
BIOSAMPLE
ASSAY
139 results
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ChIP-seq
total RNA-seq
GRO-seq
in vitro differentiated cells
adipocyte
53
pancreatic endoderm
18
4
1
hepatocyte
15
definitive endodermal cell
8
2
1
primitive gut cell
8
2
1
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