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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
45
ChIP-seq
Assay category
45
DNA binding
Target of assay
91
histone
91
histone modification
broad histone mark
44
narrow histone mark
33
transcription factor
31
control
6
RNA binding protein
3
chromatin remodeller
Date released
17
August, 2017
13
December, 2017
May, 2021
8
February, 2018
7
August, 2021
Available data
41
bam
40
bed narrowPeak
40
bigWig
34
fastq
11
tagAlign
5
bigBed narrowPeak
4
bed bed3+
Organism
45
Homo sapiens
Biosample type
325
tissue
63
primary cell
45
in vitro differentiated cells
18
cell line
1
stem cell
Organ
17
connective tissue
8
embryo
7
epithelium
5
liver
Project
45
AMP
Genome assembly (visualization)
40
GRCh38
40
hg19
Lab
45
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
2
inconsistent control read length
month_released!
August, 2018
May, 2021
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
45 results
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ChIP-seq
in vitro differentiated cells
adipocyte
17
neural progenitor cell
7
pancreatic endoderm
6
hepatocyte
5
Hepatic endoderm
2
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