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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
104
ChIP-seq
Assay category
104
DNA binding
Target of assay
112
histone
112
histone modification
56
broad histone mark
55
narrow histone mark
49
transcription factor
37
control
11
RNA binding protein
3
chromatin remodeller
Date released
38
August, 2017
27
May, 2021
24
December, 2017
8
February, 2018
7
August, 2021
Available data
78
bam
77
bigWig
72
bed narrowPeak
66
fastq
16
tagAlign
10
bed bed3+
7
bigBed narrowPeak
Organism
104
Homo sapiens
Biosample type
409
tissue
380
cell line
121
primary cell
104
in vitro differentiated cells
1
stem cell
Organ
38
connective tissue
11
embryo
11
epithelium
7
liver
2
pancreas
Project
104
AMP
Genome assembly (visualization)
77
GRCh38
77
hg19
Lab
82
AMP-T2D consortium
22
Kyle Gaulton, UCSD
Audit category:
5
inconsistent ontology term
Audit category:
6
missing controlled_by
Audit category:
12
inconsistent control read length
month_released!
December, 2019
organ_slims!
musculature of body
BIOSAMPLE
ASSAY
104 results
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ChIP-seq
in vitro differentiated cells
adipocyte
38
embryonic stem cell
23
pancreatic endoderm
9
hepatocyte
7
neural progenitor cell
7
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