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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
24
ChIP-seq
17
total RNA-seq
4
pCHi-C
2
Hi-C
Assay category
24
DNA binding
17
Transcription
2
3D chromatin structure
Target of assay
16
histone
16
histone modification
8
broad histone mark
8
control
8
narrow histone mark
Date released
132
May, 2021
68
August, 2017
43
December, 2017
42
August, 2021
39
February, 2018
26
February, 2021
16
February, 2023
8
March, 2020
8
October, 2019
5
November, 2019
4
January, 2018
2
December, 2019
1
August, 2018
0
January, 2021
Available data
41
bam
39
fastq
33
bigWig
19
tsv
16
bed narrowPeak
4
bedpe bed3+
2
hic
2
ibed
Organism
47
Homo sapiens
Biosample type
48
tissue
47
in vitro differentiated cells
11
cell line
9
primary cell
4
stem cell
Organ
13
embryo
Project
47
AMP
Genome assembly (visualization)
37
hg19
33
GRCh38
Lab
47
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
Audit category:
2
inconsistent control read length
month_released!
May, 2022
BIOSAMPLE
ASSAY
47 results
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ChIP-seq
total RNA-seq
pCHi-C
Hi-C
in vitro differentiated cells
pancreatic endoderm
9
4
embryonic stem cell
3
2
1
definitive endodermal cell
3
2
endocrine cell
3
2
posterior foregut
3
2
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