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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
106
total RNA-seq
22
ChIP-seq
9
ATAC-seq
Assay category
106
Transcription
22
DNA binding
9
DNA accessibility
Target of assay
histone
21
histone modification
16
transcription factor
narrow histone mark
10
broad histone mark
6
control
5
RNA binding protein
Date released
111
May, 2021
31
August, 2017
28
August, 2021
26
February, 2021
23
February, 2018
19
December, 2017
16
February, 2023
8
March, 2020
8
October, 2019
5
November, 2019
4
January, 2018
2
December, 2019
1
August, 2018
Available data
110
bigWig
106
bam
101
tsv
5
tagAlign
4
bed bedgraph
4
bed narrowPeak
Organism
137
Homo sapiens
Biosample type
585
tissue
137
in vitro differentiated cells
136
primary cell
116
cell line
Organ
9
connective tissue
4
epithelium
2
embryo
2
pancreas
1
heart
Project
137
AMP
Genome assembly (visualization)
114
hg19
105
GRCh38
Lab
110
AMP-T2D consortium
27
Kyle Gaulton, UCSD
Audit category:
86
inconsistent ontology term
target.investigated_as!
histone
narrow histone mark
BIOSAMPLE
ASSAY
137 results
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total RNA-seq
ChIP-seq
ATAC-seq
in vitro differentiated cells
cardiomyocytes
59
3
embryonic stem cell
5
17
5
cardiac precursors (cardiac muscle cell)
18
induced pluripotent stem cell
9
adipocyte
4
4
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