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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
82
total RNA-seq
32
ChIP-seq
5
ATAC-seq
Assay category
82
Transcription
32
DNA binding
5
DNA accessibility
Target of assay
21
histone
21
histone modification
16
transcription factor
narrow histone mark
10
broad histone mark
6
control
5
RNA binding protein
Date released
119
May, 2021
52
August, 2017
August, 2021
26
February, 2021
22
December, 2017
21
February, 2018
16
February, 2023
8
March, 2020
8
October, 2019
5
November, 2019
3
January, 2018
2
December, 2019
1
August, 2018
Available data
86
bigWig
82
bam
77
tsv
5
tagAlign
4
bed narrowPeak
Organism
119
Homo sapiens
Biosample type
154
primary cell
119
in vitro differentiated cells
40
tissue
20
cell line
Organ
4
epithelium
embryo
2
pancreas
1
connective tissue
1
heart
Project
119
AMP
Genome assembly (visualization)
86
hg19
81
GRCh38
Lab
82
AMP-T2D consortium
37
Kyle Gaulton, UCSD
Audit category:
66
inconsistent ontology term
month_released!
August, 2021
organ_slims!
embryo
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
119 results
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total RNA-seq
ChIP-seq
ATAC-seq
in vitro differentiated cells
cardiomyocytes
59
3
embryonic stem cell
5
27
5
induced pluripotent stem cell
9
pancreatic PP cell
2
cardiac fibroblast
1
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