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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 84total RNA-seq
  • 43ChIP-seq
  • 5ATAC-seq
Assay category
  • 84Transcription
  • 43DNA binding
  • 5DNA accessibility
Target of assay
  • 21histone
  • 21histone modification
  • 16transcription factor
  • 11narrow histone mark
  • 10broad histone mark
  • 6control
  • 5RNA binding protein
Date released
  • 132May, 2021
  • 68August, 2017
  • 43December, 2017
  • 42August, 2021
  • 39February, 2018
  • 26February, 2021
  • 16February, 2023
  • 8March, 2020
  • 8October, 2019
  • 5November, 2019
  • 4January, 2018
  • 2December, 2019
  • 1August, 2018
Available data
  • 89bigWig
  • 85bam
  • 79tsv
  • 6tagAlign
  • 5bed narrowPeak
Organism
  • 132Homo sapiens
Biosample type
  • 206primary cell
  • 132in vitro differentiated cells
  • 40tissue
  • 21cell line
Organ
  • 5epithelium
  • 3pancreas
  • 2embryo
  • 1connective tissue
  • 1heart
Project
  • 132AMP
Genome assembly (visualization)
  • 89hg19
  • 84GRCh38
Lab
  • 85AMP-T2D consortium
  • 47Kyle Gaulton, UCSD
Audit category:
  • 68inconsistent ontology term
BIOSAMPLE
ASSAY

132 results

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total RNA-seq
ChIP-seq
ATAC-seq
in vitro differentiated cells
cardiomyocytes593
embryonic stem cell5375
induced pluripotent stem cell9
pancreatic PP cell3
cardiac fibroblast1
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