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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
74
ChIP-seq
Assay category
74
DNA binding
Target of assay
74
histone
74
histone modification
38
narrow histone mark
36
broad histone mark
28
control
26
transcription factor
7
RNA binding protein
1
chromatin remodeller
Date released
24
December, 2017
20
May, 2021
16
February, 2018
14
August, 2021
Available data
53
bam
52
bed narrowPeak
52
bigWig
40
fastq
13
tagAlign
12
bigBed narrowPeak
8
bed bed3+
Organism
74
Homo sapiens
Biosample type
522
tissue
171
primary cell
74
in vitro differentiated cells
19
cell line
2
stem cell
Organ
connective tissue
15
epithelium
12
embryo
12
liver
pancreas
Project
74
AMP
Genome assembly (visualization)
52
GRCh38
51
hg19
Lab
54
AMP-T2D consortium
20
Kyle Gaulton, UCSD
Audit category:
2
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
7
inconsistent control read length
organ_slims!
connective tissue
pancreas
BIOSAMPLE
ASSAY
74 results
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ChIP-seq
in vitro differentiated cells
embryonic stem cell
22
neural progenitor cell
14
hepatocyte
12
pancreatic endoderm
10
definitive endodermal cell
4
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