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Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
55
ChIP-seq
Assay category
55
DNA binding
Target of assay
112
histone
112
histone modification
56
broad histone mark
55
narrow histone mark
49
transcription factor
37
control
11
RNA binding protein
3
chromatin remodeller
Date released
16
August, 2017
13
December, 2017
11
May, 2021
8
February, 2018
7
August, 2021
Available data
41
bam
40
bed narrowPeak
40
bigWig
33
fastq
12
tagAlign
5
bigBed narrowPeak
4
bed bed3+
Organism
55
Homo sapiens
Biosample type
324
tissue
115
primary cell
55
in vitro differentiated cells
19
cell line
1
stem cell
Organ
16
connective tissue
8
embryo
8
epithelium
5
liver
1
pancreas
Project
55
AMP
Genome assembly (visualization)
40
GRCh38
40
hg19
Lab
45
AMP-T2D consortium
10
Kyle Gaulton, UCSD
Audit category:
2
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
2
inconsistent control read length
BIOSAMPLE
ASSAY
55 results
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ChIP-seq
in vitro differentiated cells
adipocyte
16
embryonic stem cell
11
neural progenitor cell
7
pancreatic endoderm
6
hepatocyte
5
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