Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 49ChIP-seq
Assay category
  • 49DNA binding
Target of assay
  • 112histone
  • 112histone modification
  • 56broad histone mark
  • 55narrow histone mark
  • 49transcription factor
  • 37control
  • 11RNA binding protein
  • 3chromatin remodeller
Date released
  • 22August, 2017
  • 16May, 2021
  • 11December, 2017
Available data
  • 37bam
  • 37bigWig
  • 33fastq
  • 32bed narrowPeak
  • 6bed bed3+
  • 4tagAlign
  • 2bigBed narrowPeak
Organism
  • 49Homo sapiens
Biosample type
  • 361cell line
  • 94tissue
  • 49in vitro differentiated cells
  • 10primary cell
Organ
  • 22connective tissue
  • 3embryo
  • 3epithelium
  • 2liver
  • 1pancreas
Project
  • 49AMP
Genome assembly (visualization)
  • 37GRCh38
  • 37hg19
Lab
  • 37AMP-T2D consortium
  • 12Kyle Gaulton, UCSD
Audit category:
  • 3inconsistent ontology term
Audit category:
  • 5missing controlled_by
Audit category:
  • 10inconsistent control read length
BIOSAMPLE
ASSAY

49 results

search-icontable-tab-icon
Clear Filters
ChIP-seq
in vitro differentiated cells
adipocyte22
embryonic stem cell12
cardiomyocytes3
pancreatic endoderm3
Posterior foregut2
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego