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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
ChIP-seq
3
single cell RNA-seq
Assay category
29
DNA binding
3
Transcription
Target of assay
216
histone
216
histone modification
110
broad histone mark
106
narrow histone mark
32
control
10
RNA binding protein
10
transcription factor
1
chromatin remodeller
Date released
13
August, 2017
8
June, 2019
3
July, 2019
3
May, 2021
3
November, 2017
October, 2019
1
August, 2021
1
May, 2019
Available data
29
bam
16
fastq
10
bigWig
3
tsv
2
tagAlign
Organism
32
Homo sapiens
Biosample type
160
tissue
cell line
37
in vitro differentiated cells
32
primary cell
1
stem cell
Organ
18
epithelium
12
pancreas
6
brain
3
connective tissue
2
heart
2
kidney
2
musculature of body
2
vasculature
1
blood vessel
1
eye
1
liver
Project
32
AMP
Genome assembly (visualization)
10
hg19
3
GRCh38
Lab
29
AMP-T2D consortium
3
Kyle Gaulton, UCSD
Audit category:
5
inconsistent ontology term
biosample_type!
cell line
month_released!
October, 2019
BIOSAMPLE
ASSAY
32 results
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ChIP-seq
single cell RNA-seq
primary cell
pancreatic alpha cell
6
pancreatic beta cell
6
CD8-positive, alpha-beta T cell
3
cardiac fibroblast
2
cerebellar granule cell
2
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