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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
114
ChIP-seq
Assay category
114
DNA binding
Target of assay
221
histone
221
histone modification
114
broad histone mark
107
narrow histone mark
35
control
5
RNA binding protein
5
transcription factor
Date released
66
May, 2021
17
September, 2018
10
August, 2017
10
October, 2019
8
June, 2019
2
May, 2019
1
August, 2021
Available data
118
bigWig
112
bed narrowPeak
100
bam
51
tagAlign
33
fastq
21
bigBed narrowPeak
8
bed broadPeak
bigBed broadPeak
1
bed bed3+
Organism
114
Homo sapiens
Biosample type
303
tissue
114
primary cell
in vitro differentiated cells
11
cell line
1
stem cell
Organ
29
epithelium
27
pancreas
7
blood vessel
7
vasculature
7
vein
5
kidney
4
connective tissue
4
musculature of body
1
liver
Project
70
AMP
44
T1D
Genome assembly (visualization)
110
hg19
90
GRCh38
Lab
64
Kyle Gaulton, UCSD
50
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
Audit category:
21
missing controlled_by
biosample_type!
in vitro differentiated cells
files.file_type!
bigBed broadPeak
tar
BIOSAMPLE
ASSAY
114 results
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ChIP-seq
primary cell
monocyte
44
CD8-positive, alpha-beta T cell
20
pancreatic endocrine cell
11
endothelial cell of umbilical vein
7
pancreatic ductal cell
6
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