Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
855
target gene predictions
668
chromatin state
663
accessible chromatin
589
candidate regulatory elements
438
gene expression
157
differential activity
157
eQTL
128
variant allelic effects
118
histone modifications
74
Fine-mapped variants
29
binding sites
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
pQTL
2
other
Date released
1771
September, 2022
February, 2021
330
November, 2021
285
May, 2021
281
September, 2023
178
February, 2024
146
May, 2020
110
June, 2020
109
March, 2020
92
January, 2022
88
August, 2021
85
January, 2020
64
February, 2020
61
March, 2023
56
January, 2021
42
May, 2022
30
February, 2023
30
October, 2022
29
March, 2024
26
November, 2022
25
August, 2017
19
April, 2020
12
October, 2019
10
November, 2019
9
August, 2018
May, 2019
8
April, 2019
3
November, 2020
3
September, 2018
2
January, 2018
2
May, 2024
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
2427
bed bed3+
653
tsv
610
bed bed9
513
bigWig
27
bed bed9+
26
bigBed bed9
25
txt
13
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
3864
Homo sapiens
Biosample type
1983
primary cell
1928
tissue
1045
cell line
277
in vitro differentiated cells
4
stem cell
Organ
704
epithelium
431
kidney
296
connective tissue
290
brain
268
musculature of body
214
vasculature
212
pancreas
203
heart
197
intestine
180
limb
167
blood vessel
163
lung
107
large intestine
extraembryonic component
104
liver
90
stomach
86
skin of body
80
eye
66
small intestine
64
adipose tissue
59
adrenal gland
59
artery
52
placenta
46
ureter
41
embryo
38
thymus
35
esophagus
34
mammary gland
33
gonad
32
spinal cord
24
spleen
22
nerve
22
penis
19
ovary
19
thyroid gland
17
bone element
17
prostate gland
16
vein
15
lymphatic vessel
14
lymphoid tissue
13
testis
12
mouth
11
bronchus
11
uterus
10
breast
9
skeleton
9
urinary bladder
8
bone marrow
8
tongue
8
vagina
5
bodily fluid
4
blood
2
pituitary gland
1
pericardium
1
trachea
Project
3215
AMP
330
ENCODE
281
KPMP
59
T1D
19
LungMap
5
ITG
2
community
Genome assembly (visualization)
3200
hg19
1388
GRCh38
3
hg18
month_released!
February, 2021
May, 2019
organ_slims!
extraembryonic component
BIOSAMPLE
TYPE
3911 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
chromatin state
accessible chromatin
candidate regulatory elements
gene expression
differential activity
eQTL
variant allelic effects
histone modifications
Fine-mapped variants
binding sites
caQTL
hQTL
sQTL
variant to gene
meQTL
pQTL
other
primary cell
monocyte
2
18
15
4
84
2
1
1
CD8-positive, alpha-beta T cell
5
1
4
3
30
common myeloid progenitor, CD34-positive
14
13
13
B cell
10
8
6
9
2
endothelial cell
7
15
5
1
2
2
+ See 371 more…
tissue
heart
20
21
5
19
2
2
stomach
21
19
3
19
1
1
brain
16
18
2
16
1
2
1
kidney
14
15
10
14
1
1
lung
17
16
16
1
1
+ See 185 more…
See all biosamples
Download