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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
49
single cell RNA-seq
20
ATAC-seq
19
total RNA-seq
1
Hi-C
Assay category
68
Transcription
20
DNA accessibility
1
3D chromatin structure
Date released
593
February, 2021
343
August, 2017
340
May, 2020
276
October, 2019
246
May, 2021
233
August, 2021
218
June, 2019
200
May, 2022
183
February, 2023
168
July, 2018
120
May, 2019
108
July, 2019
91
November, 2017
80
April, 2019
76
October, 2018
73
September, 2018
59
September, 2020
49
April, 2018
48
December, 2017
47
September, 2023
41
March, 2020
40
May, 2024
40
November, 2019
27
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
11
September, 2017
10
November, 2020
8
December, 2019
7
August, 2020
7
December, 2018
7
January, 2019
5
March, 2019
3
August, 2018
3
June, 2018
3
October, 2022
2
January, 2018
1
August, 2022
1
March, 2023
Available data
88
bam
68
bigWig
68
tsv
44
fastq
20
bed narrowPeak
1
bedpe bed3+
1
hic
Organism
89
Homo sapiens
Biosample type
46
tissue
43
primary cell
16
cell line
5
in vitro differentiated cells
Organ
78
pancreas
33
epithelium
3
connective tissue
1
adipose tissue
Project
89
AMP
Genome assembly (visualization)
89
hg19
88
GRCh38
Lab
89
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
89 results
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Clear Filters
single cell RNA-seq
ATAC-seq
total RNA-seq
Hi-C
tissue
islet of Langerhans
6
19
19
1
adipose tissue(adipose white tissue)
1
primary cell
pancreatic delta cell
7
pancreatic acinar cell
6
pancreatic ductal cell
6
pancreatic polypeptide-secreting cell
6
mesenchymal cell
5
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