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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
77
ATAC-seq
43
single cell RNA-seq
41
WGBS
32
snATAC-seq
26
total RNA-seq
Assay category
109
DNA accessibility
69
Transcription
41
DNA methylation
Date released
593
February, 2021
343
August, 2017
340
May, 2020
276
October, 2019
246
May, 2021
233
August, 2021
218
June, 2019
200
May, 2022
183
February, 2023
168
July, 2018
120
May, 2019
108
July, 2019
91
November, 2017
80
April, 2019
76
October, 2018
73
September, 2018
59
September, 2020
49
April, 2018
48
December, 2017
47
September, 2023
41
March, 2020
40
May, 2024
40
November, 2019
27
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
11
September, 2017
10
November, 2020
8
December, 2019
7
August, 2020
7
December, 2018
7
January, 2019
5
March, 2019
3
August, 2018
3
June, 2018
3
October, 2022
2
January, 2018
1
August, 2022
1
March, 2023
Available data
134
zippedFastqFolder
38
bed narrowPeak
24
bam
24
fastq
20
bigWig
7
txt
1
bed bed3+
Organism
218
Homo sapiens
Biosample type
134
primary cell
85
tissue
Organ
104
pancreas
80
epithelium
40
liver
19
lung
2
musculature of body
Project
134
HPAP
66
AMP
19
LungMap
Genome assembly (visualization)
39
hg19
Lab
134
Klaus Kaestner, Upenn
40
Karen Mohlke, UNC
24
Kyle Gaulton, UCSD
19
Xin Sun, UCSD
2
AMP-T2D consortium
Audit category:
1
audit script error
BIOSAMPLE
ASSAY
219 results
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Clear Filters
ATAC-seq
single cell RNA-seq
WGBS
snATAC-seq
total RNA-seq
primary cell
Langerhans cell
33
21
pancreatic alpha cell
22
25
pancreatic beta cell
13
16
pancreatic acinar cell
4
tissue
liver
20
20
islet of Langerhans
18
6
lung
9
10
skeletal muscle tissue
1
1
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