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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
121
ChIP-seq
94
total RNA-seq
17
pCHi-C
13
ATAC-seq
1
DNAme array
Assay category
121
DNA binding
94
Transcription
13
DNA accessibility
1
DNA methylation
Target of assay
118
histone
118
histone modification
66
broad histone mark
52
narrow histone mark
3
control
Date released
February, 2021
343
August, 2017
340
May, 2020
276
October, 2019
246
May, 2021
233
August, 2021
218
June, 2019
200
May, 2022
183
February, 2023
168
July, 2018
120
May, 2019
108
July, 2019
91
November, 2017
80
April, 2019
October, 2018
73
September, 2018
59
September, 2020
49
April, 2018
48
December, 2017
47
September, 2023
41
March, 2020
40
May, 2024
40
November, 2019
27
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
11
September, 2017
10
November, 2020
8
December, 2019
7
August, 2020
7
December, 2018
7
January, 2019
5
March, 2019
3
August, 2018
3
June, 2018
3
October, 2022
2
January, 2018
1
August, 2022
1
March, 2023
Available data
209
bigWig
187
bam
127
bed narrowPeak
90
tsv
84
tagAlign
2
bed bed3+
Organism
246
Homo sapiens
Biosample type
206
primary cell
132
in vitro differentiated cells
40
tissue
21
cell line
Organ
37
pancreas
2
heart
1
bone element
1
bone marrow
1
connective tissue
1
thymus
Project
152
T1D
94
AMP
Genome assembly (visualization)
222
hg19
187
GRCh38
Lab
188
Kyle Gaulton, UCSD
58
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
February, 2021
October, 2018
BIOSAMPLE
ASSAY
246 results
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Clear Filters
ChIP-seq
total RNA-seq
pCHi-C
ATAC-seq
DNAme array
primary cell
monocyte
85
52
1
13
1
CD8-positive, alpha-beta T cell
33
2
1
naive thymus-derived CD4-positive, alpha-beta T cell
2
1
CD4-positive, alpha-beta T cell
2
neutrophil
1
1
+ See 11 more…
tissue
islet of Langerhans
36
cardiac atrium
1
cardiac ventricle
1
pancreas
1
thymus
1
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