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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
ChIP-seq
4
total RNA-seq
1
RRBS
Assay category
5
DNA binding
4
Transcription
1
DNA methylation
Target of assay
2
control
2
histone
2
histone modification
2
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
5
July, 2019
5
June, 2019
Available data
12
bam
10
bigWig
6
bed narrowPeak
6
bigBed narrowPeak
4
tsv
bed bed3+
3
bed broadPeak
3
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
10
Homo sapiens
Biosample type
286
tissue
66
cell line
10
primary cell
1
in vitro differentiated cells
Organ
380
epithelium
341
pancreas
31
connective tissue
29
vasculature
26
kidney
25
blood vessel
20
vein
13
brain
13
musculature of body
10
heart
8
blood
8
bodily fluid
8
liver
4
eye
adipose tissue
2
artery
1
bone element
1
bone marrow
1
pericardium
Project
10
AMP
Genome assembly (visualization)
8
hg19
7
GRCh38
Lab
10
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
files.file_type!
bed bed3+
month_released!
September, 2017
organ_slims!
adipose tissue
BIOSAMPLE
ASSAY
10 results
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ChIP-seq
total RNA-seq
RRBS
primary cell
cardiac fibroblast
5
1
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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