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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
121
ChIP-seq
53
total RNA-seq
16
pCHi-C
13
ATAC-seq
1
DNAme array
1
single cell RNA-seq
Assay category
121
DNA binding
54
Transcription
13
DNA accessibility
1
DNA methylation
Target of assay
118
histone
118
histone modification
66
broad histone mark
52
narrow histone mark
3
control
Date released
204
May, 2021
147
May, 2020
134
May, 2022
February, 2023
73
September, 2018
59
August, 2017
59
September, 2020
48
July, 2018
47
February, 2021
43
April, 2018
32
October, 2019
31
June, 2019
27
July, 2019
9
November, 2017
8
January, 2021
7
August, 2020
5
December, 2019
5
May, 2019
5
November, 2020
5
September, 2017
3
August, 2018
3
June, 2018
3
October, 2022
2
October, 2018
1
August, 2021
1
March, 2020
1
March, 2023
1
November, 2018
Available data
171
bigWig
149
bam
127
bed narrowPeak
84
tagAlign
52
tsv
bed bed3+
1
csv
1
fastq
Organism
205
Homo sapiens
Biosample type
205
primary cell
132
in vitro differentiated cells
82
cell line
57
tissue
Organ
1
bone element
1
bone marrow
1
connective tissue
Project
151
T1D
54
AMP
Genome assembly (visualization)
182
hg19
149
GRCh38
Lab
184
Kyle Gaulton, UCSD
21
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
bed bed3+
month_released!
February, 2023
BIOSAMPLE
ASSAY
205 results
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Clear Filters
ChIP-seq
total RNA-seq
pCHi-C
ATAC-seq
DNAme array
single cell RNA-seq
primary cell
monocyte
85
52
1
13
1
CD8-positive, alpha-beta T cell
33
1
naive thymus-derived CD4-positive, alpha-beta T cell
2
1
CD4-positive, alpha-beta T cell
2
neutrophil
1
1
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