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Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1118
target gene predictions
819
accessible chromatin
478
gene expression
472
differential activity
366
candidate regulatory elements
210
histone modifications
100
binding sites
81
variant allelic effects
55
eQTL
33
chromatin state
23
caQTL
5
hQTL
5
sQTL
3
meQTL
1
other
Date released
1069
July, 2026
456
February, 2021
333
November, 2021
327
September, 2022
320
May, 2026
281
September, 2023
256
May, 2021
152
February, 2024
86
May, 2020
56
January, 2021
55
March, 2023
53
June, 2020
42
August, 2021
40
May, 2022
40
May, 2024
37
January, 2022
33
July, 2025
31
October, 2022
21
January, 2020
19
April, 2020
16
February, 2020
9
August, 2018
9
November, 2022
6
August, 2017
5
March, 2020
5
October, 2019
4
February, 2023
3
November, 2020
2
January, 2025
1
July, 2020
1
June, 2021
1
March, 2024
Available data
2738
bed bed3+
612
tsv
410
bigWig
bed bed9
108
txt
27
bed bed9+
16
bigBed narrowPeak
12
bed bed3
12
bed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
2
csv
Organism
3724
Homo sapiens
Collection Tags
543
ENCODE-rE2G
393
HDMA
376
DGA
373
AMP
358
T2DKP
330
T1D
320
EpiMap
320
pyxis
281
KPMP
216
ChIP-Atlas
211
BLUEPRINT
208
ENCODE
133
CATlas
81
T2DKP
55
HPAP
45
T2D
35
eQTLCatalogue
26
FNIH_projects-heart
15
CMDGA
12
FNIH_projects-liver
12
ROADMAP
6
4DN
1
GTEx
Biosample type
5465
tissue
3769
primary cell
2380
cell line
474
in vitro differentiated cells
4
stem cell
Organ
778
epithelium
466
blood
326
kidney
312
connective tissue
227
brain
202
heart
154
skin of body
153
vasculature
150
pancreas
133
liver
112
blood vessel
74
lung
65
eye
60
__MARKER__
59
musculature of body
52
adipose tissue
46
muscle organ
43
mammary gland
36
thymus
35
artery
35
extraembryonic component
35
penis
25
adrenal gland
24
spleen
23
intestine
23
thyroid gland
18
embryo
17
bone element
16
vein
15
lymphatic vessel
14
bronchus
12
bone marrow
11
stomach
10
esophagus
10
placenta
9
bodily fluid
9
prostate gland
6
large intestine
5
skeleton
5
trachea
5
uterus
4
gonad
4
small intestine
3
mouth
3
spinal cord
2
ovary
1
limb
1
pericardium
1
testis
Project
3073
AMP
333
ENCODE
281
KPMP
59
T1D
19
LungMap
4
community
Genome assembly (visualization)
1677
hg19
1662
GRCh38
Encyclopedia version
1
Adipocyte.narrowpeak.bed.gz Adipocyte.consensus_summit_features.bed.gz
1
Endothelial.narrowpeak.bed.gz Endothelial.consensus_summit_features.bed.gz
1
FAP.narrowpeak.bed.gz Mesenchymal_Stem_Cell.consensus_summit_features.bed.gz
1
Macrophage.narrowpeak.bed.gz Macrophage.consensus_summit_features.bed.gz
1
Neuromuscular_junction.narrowpeak.bed.gz Neuromuscular_junction.consensus_summit_features.bed.gz
1
Neuronal.narrowpeak.bed.gz Neuronal.consensus_summit_features.bed.gz
1
Satellite_Cell.narrowpeak.bed.gz Satellite_Cell.consensus_summit_features.bed.gz
1
Smooth_Muscle.narrowpeak.bed.gz Smooth_Muscle.consensus_summit_features.bed.gz
1
T_cell.narrowpeak.bed.gz T_cell.consensus_summit_features.bed.gz
1
Type_1.narrowpeak.bed.gz Type_1.consensus_summit_features.bed.gz
1
Type_2a.narrowpeak.bed.gz Type_2a.consensus_summit_features.bed.gz
1
Type_2x.narrowpeak.bed.gz Type_2x.consensus_summit_features.bed.gz
files.file_type!
bed bed9
BIOSAMPLE
TYPE
3769 results
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target gene predictions
accessible chromatin
gene expression
differential activity
candidate regulatory elements
histone modifications
binding sites
variant allelic effects
eQTL
chromatin state
caQTL
hQTL
sQTL
meQTL
other
primary cell
monocyte
2
18
15
4
86
1
4
2
1
1
fibroblast
28
40
10
3
1
6
2
endothelial cell
17
24
9
25
3
1
2
2
2
3
CD8-positive, alpha-beta T cell
27
4
3
7
30
1
macrophage
13
22
2
17
3
3
8
2
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