Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
454
accessible chromatin
370
gene expression
368
target gene predictions
367
candidate regulatory elements
210
histone modifications
195
chromatin state
152
differential activity
100
binding sites
80
variant allelic effects
46
eQTL
11
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
484
September, 2022
373
February, 2021
323
November, 2021
281
September, 2023
256
May, 2021
151
February, 2024
86
May, 2020
56
January, 2021
55
March, 2023
53
June, 2020
41
May, 2024
40
May, 2022
37
January, 2022
31
October, 2022
January, 2020
19
April, 2020
17
August, 2021
16
February, 2020
9
August, 2018
9
November, 2022
7
October, 2019
6
August, 2017
5
March, 2020
4
February, 2023
3
November, 2020
1
July, 2020
1
June, 2021
1
March, 2024
Available data
1602
bed bed3+
591
tsv
383
bigWig
162
bed bed9
txt
27
bed bed9+
16
bigBed narrowPeak
3
bam
bed gappedPeak
3
xls
2
bigBed bed9
Organism
2320
Homo sapiens
Biosample type
2528
tissue
2365
primary cell
2351
cell line
467
in vitro differentiated cells
4
stem cell
Organ
735
epithelium
279
connective tissue
215
kidney
161
vasculature
123
pancreas
110
blood vessel
100
skin of body
63
liver
49
musculature of body
46
mammary gland
41
penis
40
extraembryonic component
34
lung
33
heart
29
artery
27
brain
23
intestine
22
embryo
22
eye
20
lymphatic vessel
18
vein
16
bronchus
14
bone element
13
bone marrow
adrenal gland
11
stomach
10
esophagus
10
placenta
10
prostate gland
9
blood
9
bodily fluid
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
3
thyroid gland
2
ovary
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
1681
AMP
323
ENCODE
281
KPMP
59
T1D
19
LungMap
2
community
Genome assembly (visualization)
1805
hg19
713
GRCh38
files.file_type!
bed gappedPeak
txt
month_released!
January, 2020
organ_slims!
adrenal gland
BIOSAMPLE
TYPE
2365 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
gene expression
target gene predictions
candidate regulatory elements
histone modifications
chromatin state
differential activity
binding sites
variant allelic effects
eQTL
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
18
15
2
86
1
4
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
4
2
5
7
30
1
B cell
6
2
10
17
8
endothelial cell
15
6
7
3
1
2
2
1
2
+ See 425 more…
See all biosamples
Download