Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
479
accessible chromatin
370
target gene predictions
340
gene expression
200
candidate regulatory elements
197
chromatin state
152
differential activity
118
histone modifications
80
variant allelic effects
46
eQTL
29
binding sites
11
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
484
September, 2022
February, 2021
333
November, 2021
281
September, 2023
256
May, 2021
152
February, 2024
86
May, 2020
56
January, 2021
55
March, 2023
52
June, 2020
42
August, 2021
41
May, 2024
40
May, 2022
37
January, 2022
31
October, 2022
23
January, 2020
19
April, 2020
February, 2020
9
August, 2018
9
November, 2022
7
October, 2019
6
August, 2017
5
March, 2020
4
February, 2023
3
November, 2020
1
July, 2020
1
June, 2021
1
March, 2024
Available data
1299
bed bed3+
469
tsv
406
bigWig
164
bed bed9
27
bed bed9+
25
txt
13
bigBed narrowPeak
4
bigBed bed9
3
bam
bed gappedPeak
3
xls
Organism
1989
Homo sapiens
Biosample type
2034
primary cell
1959
tissue
909
cell line
281
in vitro differentiated cells
4
stem cell
Organ
654
epithelium
230
connective tissue
209
kidney
142
vasculature
116
pancreas
92
blood vessel
72
skin of body
58
liver
40
musculature of body
34
mammary gland
32
extraembryonic component
30
brain
29
lung
23
heart
22
intestine
22
penis
19
artery
18
eye
18
lymphatic vessel
17
embryo
15
vein
11
adrenal gland
11
bronchus
11
stomach
9
esophagus
8
bone element
8
bone marrow
8
prostate gland
7
placenta
6
large intestine
4
gonad
4
small intestine
3
mouth
3
spinal cord
3
thyroid gland
3
uterus
2
ovary
1
blood
bodily fluid
1
limb
1
testis
1
thymus
1
trachea
Project
1340
AMP
333
ENCODE
281
KPMP
59
T1D
19
LungMap
2
community
Genome assembly (visualization)
1504
hg19
745
GRCh38
files.file_type!
bed gappedPeak
month_released!
February, 2020
February, 2021
organ_slims!
bodily fluid
BIOSAMPLE
TYPE
2034 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
gene expression
candidate regulatory elements
chromatin state
differential activity
histone modifications
variant allelic effects
eQTL
binding sites
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
18
2
15
84
4
2
1
1
CD8-positive, alpha-beta T cell
4
5
3
1
30
common myeloid progenitor, CD34-positive
14
13
13
B cell
6
10
2
12
8
endothelial cell
15
7
5
3
2
1
2
+ See 376 more…
See all biosamples
Download