Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
458
gene expression
418
accessible chromatin
344
target gene predictions
307
candidate regulatory elements
207
histone modifications
185
chromatin state
141
differential activity
86
binding sites
58
variant allelic effects
46
eQTL
9
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
454
September, 2022
436
February, 2021
330
November, 2021
261
September, 2023
254
May, 2021
138
February, 2024
May, 2020
56
January, 2021
51
March, 2023
50
June, 2020
42
August, 2021
40
May, 2022
37
January, 2022
29
October, 2022
19
January, 2020
17
April, 2020
13
February, 2020
9
August, 2018
9
November, 2022
7
October, 2019
5
August, 2017
4
March, 2020
3
November, 2020
2
February, 2023
2
May, 2024
1
July, 2020
1
June, 2021
1
March, 2024
Available data
1445
bed bed3+
563
tsv
351
bigWig
153
bed bed9
108
txt
27
bed bed9+
16
bigBed narrowPeak
3
bam
bed gappedPeak
3
xls
2
bigBed bed9
Organism
2271
Homo sapiens
Biosample type
2434
tissue
2341
cell line
2271
primary cell
462
in vitro differentiated cells
4
stem cell
Organ
803
epithelium
303
kidney
278
connective tissue
161
vasculature
123
pancreas
blood vessel
100
skin of body
60
liver
49
musculature of body
46
mammary gland
41
penis
40
extraembryonic component
34
lung
31
heart
29
artery
28
brain
23
intestine
22
embryo
22
eye
18
vein
17
lymphatic vessel
16
bronchus
13
bone element
12
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
placenta
10
prostate gland
9
blood
9
bodily fluid
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
3
thyroid gland
2
ovary
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
1602
AMP
330
ENCODE
261
KPMP
59
T1D
17
LungMap
2
community
Genome assembly (visualization)
1641
hg19
673
GRCh38
files.file_type!
bed gappedPeak
month_released!
May, 2020
organ_slims!
adipose tissue
blood vessel
BIOSAMPLE
TYPE
2271 results
search-icon
table-tab-icon
Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
histone modifications
chromatin state
differential activity
binding sites
variant allelic effects
eQTL
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
15
16
1
86
1
4
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
3
2
4
7
30
1
endothelial cell
9
15
7
1
2
2
1
2
B cell
2
4
9
14
8
+ See 425 more…
See all biosamples
Download