Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
477
accessible chromatin
472
gene expression
210
target gene predictions
207
histone modifications
166
candidate regulatory elements
150
differential activity
95
binding sites
81
variant allelic effects
46
eQTL
37
chromatin state
10
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
September, 2022
448
February, 2021
333
November, 2021
276
September, 2023
255
May, 2021
152
February, 2024
86
May, 2020
56
January, 2021
55
March, 2023
51
June, 2020
42
August, 2021
40
May, 2022
37
January, 2022
30
October, 2022
23
January, 2020
19
April, 2020
13
February, 2020
9
August, 2018
9
November, 2022
7
October, 2019
6
August, 2017
5
March, 2020
3
February, 2023
3
November, 2020
2
May, 2024
1
July, 2020
1
June, 2021
1
March, 2024
Available data
1255
bed bed3+
586
tsv
407
bigWig
108
txt
27
bed bed9+
15
bigBed narrowPeak
4
bed bed9
4
bigBed bed9
Organism
1918
Homo sapiens
Biosample type
1963
primary cell
1806
cell line
1245
tissue
365
in vitro differentiated cells
4
stem cell
Organ
686
epithelium
282
kidney
208
connective tissue
124
vasculature
122
pancreas
84
blood vessel
57
liver
49
skin of body
44
musculature of body
25
mammary gland
23
brain
23
intestine
23
penis
22
heart
22
lung
artery
16
extraembryonic component
14
eye
14
vein
11
adrenal gland
11
bone element
11
lymphatic vessel
11
stomach
10
bone marrow
10
bronchus
10
embryo
9
blood
9
bodily fluid
7
esophagus
7
placenta
6
large intestine
5
trachea
5
uterus
4
gonad
4
prostate gland
4
small intestine
3
thyroid gland
2
ovary
1
adipose tissue
1
limb
1
mouth
pericardium
1
spinal cord
1
testis
1
thymus
Project
1274
AMP
333
ENCODE
276
KPMP
59
T1D
19
LungMap
2
community
Genome assembly (visualization)
1304
hg19
545
GRCh38
files.file_type!
bed gappedPeak
month_released!
September, 2022
organ_slims!
artery
pericardium
BIOSAMPLE
TYPE
1963 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
gene expression
target gene predictions
histone modifications
candidate regulatory elements
differential activity
binding sites
variant allelic effects
eQTL
chromatin state
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
18
15
2
86
1
4
2
1
1
CD8-positive, alpha-beta T cell
4
3
5
30
7
1
endothelial cell
15
9
7
1
2
2
1
2
hepatocyte
8
13
2
4
1
2
fibroblast
16
4
1
6
2
+ See 434 more…
See all biosamples
Download