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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
ATAC-seq
4
ChIP-seq
2
total RNA-seq
1
DNAme array
1
Hi-C
Assay category
13
DNA accessibility
4
DNA binding
2
Transcription
1
3D chromatin structure
1
DNA methylation
Target of assay
4
histone
4
histone modification
2
broad histone mark
2
narrow histone mark
Date released
134
May, 2022
102
May, 2020
88
February, 2023
72
September, 2018
59
August, 2017
59
September, 2020
55
June, 2019
48
February, 2021
48
July, 2018
43
April, 2018
34
October, 2019
31
July, 2019
20
May, 2021
9
November, 2017
7
August, 2020
6
November, 2020
5
December, 2019
5
May, 2019
5
September, 2017
4
August, 2021
3
August, 2018
3
June, 2018
3
October, 2022
2
October, 2018
1
March, 2020
1
March, 2023
Available data
14
bam
13
bed narrowPeak
1
bigWig
1
hic
1
tsv
Organism
21
Homo sapiens
Biosample type
85
in vitro differentiated cells
38
tissue
23
cell line
21
primary cell
2
stem cell
Project
20
AMP
1
ITG
Genome assembly (visualization)
15
GRCh38
14
hg19
Lab
Kyle Gaulton, UCSD
20
AMP-T2D consortium
1
ITG
files.file_type!
csv
lab.title!
Kyle Gaulton, UCSD
BIOSAMPLE
ASSAY
21 results
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Clear Filters
ATAC-seq
ChIP-seq
total RNA-seq
DNAme array
Hi-C
primary cell
monocyte
13
1
1
1
naive thymus-derived CD4-positive, alpha-beta T cell
2
chondrocytes
1
embryonic stem cell
1
neutrophil
1
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