Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
ChIP-seq
3
ATAC-seq
2
DNase-seq
1
RRBS
Assay category
41
DNA binding
5
DNA accessibility
1
DNA methylation
Target of assay
27
histone
27
histone modification
17
narrow histone mark
12
control
10
broad histone mark
2
RNA binding protein
2
transcription factor
1
chromatin remodeller
Date released
147
May, 2020
134
May, 2022
122
May, 2021
88
February, 2023
73
September, 2018
59
September, 2020
55
June, 2019
48
February, 2021
48
July, 2018
47
August, 2017
43
April, 2018
33
October, 2019
31
July, 2019
9
November, 2017
8
January, 2021
7
August, 2020
6
November, 2020
5
December, 2019
5
May, 2019
5
September, 2017
3
August, 2018
3
June, 2018
2
October, 2018
1
November, 2018
Available data
58
bam
58
fastq
46
bigWig
33
bed narrowPeak
19
bigBed narrowPeak
14
bed broadPeak
14
bigBed broadPeak
tagAlign
1
bed bedMethyl
1
bigBed bedMethyl
Organism
47
Homo sapiens
Biosample type
225
tissue
54
in vitro differentiated cells
47
primary cell
Organ
41
pancreas
29
epithelium
Project
47
AMP
Genome assembly (visualization)
35
hg19
31
GRCh38
Lab
47
AMP-T2D consortium
Audit category:
12
missing controlled_by
Audit category:
5
inconsistent control read length
1
inconsistent assembly
1
inconsistent control run_type
files.file_type!
hic
tagAlign
target.investigated_as!
nucleotide modification
BIOSAMPLE
ASSAY
47 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
RRBS
primary cell
pancreatic alpha cell
13
1
pancreatic beta cell
13
1
pancreatic endocrine cell
12
skeletal muscle myoblast
3
2
1
pancreatic acinar cell
1
Download