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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
71
ChIP-seq
Assay category
71
DNA binding
Target of assay
139
histone
139
histone modification
71
broad histone mark
68
narrow histone mark
33
control
10
RNA binding protein
10
transcription factor
1
chromatin remodeller
Date released
22
May, 2021
17
September, 2018
12
October, 2019
10
August, 2017
8
June, 2019
2
May, 2019
Available data
118
bigWig
112
bed narrowPeak
100
bam
tagAlign
33
fastq
21
bigBed narrowPeak
8
bed broadPeak
8
bigBed broadPeak
1
bed bed3+
Organism
71
Homo sapiens
Biosample type
227
tissue
71
primary cell
42
in vitro differentiated cells
13
cell line
1
stem cell
Organ
30
epithelium
27
pancreas
9
blood vessel
9
vasculature
9
vein
5
kidney
4
connective tissue
4
musculature of body
Project
71
AMP
Genome assembly (visualization)
67
hg19
45
GRCh38
Lab
51
AMP-T2D consortium
20
Kyle Gaulton, UCSD
Audit category:
8
inconsistent ontology term
Audit category:
21
missing controlled_by
files.file_type!
tagAlign
lab.title!
Xin Sun, UCSD
BIOSAMPLE
ASSAY
71 results
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ChIP-seq
primary cell
CD8-positive, alpha-beta T cell
20
pancreatic endocrine cell
11
endothelial cell of umbilical vein
9
pancreatic ductal cell
6
mesenchymal stem cell
4
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