Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
446
accessible chromatin
348
target gene predictions
200
candidate regulatory elements
197
chromatin state
118
histone modifications
74
variant allelic effects
44
eQTL
34
gene expression
29
binding sites
11
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
483
September, 2022
February, 2021
315
November, 2021
184
May, 2021
105
February, 2024
86
May, 2020
52
June, 2020
40
May, 2022
39
May, 2024
37
January, 2022
36
January, 2021
31
October, 2022
23
January, 2020
19
April, 2020
17
August, 2021
16
February, 2020
9
November, 2022
6
August, 2017
5
March, 2020
4
February, 2023
2
August, 2018
2
November, 2020
2
October, 2019
Available data
1237
bed bed3+
tsv
369
bigWig
164
bed bed9
27
bed bed9+
25
txt
4
bigBed bed9
2
bigBed narrowPeak
Organism
1468
Homo sapiens
Biosample type
1745
tissue
1513
primary cell
1005
cell line
233
in vitro differentiated cells
4
stem cell
Organ
445
epithelium
207
connective tissue
101
vasculature
pancreas
72
skin of body
66
blood vessel
64
kidney
44
liver
41
musculature of body
34
mammary gland
32
extraembryonic component
30
brain
29
lung
27
heart
22
intestine
22
penis
18
eye
17
embryo
16
artery
15
vein
13
lymphatic vessel
11
adrenal gland
11
bronchus
11
stomach
9
esophagus
8
bone element
8
bone marrow
8
prostate gland
7
placenta
6
large intestine
4
gonad
4
small intestine
3
mouth
3
spinal cord
3
thyroid gland
3
uterus
2
ovary
1
adipose tissue
1
blood
1
bodily fluid
1
limb
1
pericardium
1
testis
1
thymus
1
trachea
Project
1140
AMP
315
ENCODE
39
T1D
19
LungMap
Genome assembly (visualization)
1443
hg19
713
GRCh38
files.file_type!
tsv
month_released!
February, 2021
organ_slims!
pancreas
BIOSAMPLE
TYPE
1513 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
chromatin state
histone modifications
variant allelic effects
eQTL
gene expression
binding sites
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
18
2
84
4
2
1
1
CD8-positive, alpha-beta T cell
4
5
1
30
common myeloid progenitor, CD34-positive
14
13
13
B cell
6
10
12
8
fibroblast
16
4
3
6
2
1
+ See 285 more…
See all biosamples
Download