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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ChIP-seq
16
ATAC-seq
Assay category
28
DNA binding
16
DNA accessibility
Target of assay
25
control
3
histone
3
histone modification
2
broad histone mark
1
narrow histone mark
Date released
13
May, 2021
12
August, 2017
8
June, 2019
8
October, 2019
1
August, 2021
1
May, 2019
1
November, 2020
Available data
bigWig
609
bam
409
fastq
295
bed narrowPeak
270
tsv
153
zippedFastqFolder
109
bigBed narrowPeak
100
tagAlign
49
bed broadPeak
49
bigBed broadPeak
bed bed3+
10
bed bedMethyl
10
bigBed bedMethyl
6
hic
4
bedpe bed3+
4
hdf5
3
cool
2
csv
1
bed bed3
1
tar
Organism
44
Homo sapiens
Biosample type
220
tissue
78
cell line
44
primary cell
36
in vitro differentiated cells
Organ
23
epithelium
12
pancreas
5
blood vessel
5
vasculature
5
vein
4
connective tissue
3
kidney
2
heart
2
liver
2
musculature of body
1
eye
Project
44
AMP
Genome assembly (visualization)
16
GRCh38
16
hg19
Lab
44
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
files.file_type!
bed bed3+
bigWig
organ_slims!
embryo
BIOSAMPLE
ASSAY
44 results
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ChIP-seq
ATAC-seq
primary cell
monocyte
13
pancreatic alpha cell
6
pancreatic beta cell
6
endothelial cell of umbilical vein
5
cardiac fibroblast
2
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