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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
ChIP-seq
2
total RNA-seq
Assay category
9
DNA binding
2
Transcription
Target of assay
5
histone
5
histone modification
4
broad histone mark
4
control
1
narrow histone mark
Date released
7
October, 2019
2
July, 2019
2
November, 2017
Available data
32
bam
29
bigWig
bed narrowPeak
21
bigBed narrowPeak
12
bed broadPeak
12
bigBed broadPeak
8
bed bed3+
6
fastq
2
hdf5
hic
2
tsv
1
bed bedMethyl
1
bedpe bed3+
1
bigBed bedMethyl
1
tar
Organism
11
Homo sapiens
Biosample type
54
cell line
22
tissue
11
primary cell
Organ
136
epithelium
126
pancreas
19
connective tissue
11
vasculature
10
blood vessel
9
kidney
7
vein
6
brain
6
heart
6
liver
4
musculature of body
2
adipose tissue
2
artery
1
eye
1
pericardium
Project
11
AMP
Genome assembly (visualization)
6
hg19
2
GRCh38
Lab
11
AMP-T2D consortium
files.file_type!
bed narrowPeak
hic
BIOSAMPLE
ASSAY
11 results
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ChIP-seq
total RNA-seq
primary cell
endothelial cell of umbilical vein
7
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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