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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
24
ChIP-seq
6
total RNA-seq
3
ATAC-seq
3
DNase-seq
1
FAIRE-seq
Assay category
24
DNA binding
7
DNA accessibility
6
Transcription
Target of assay
21
histone
21
histone modification
12
broad histone mark
9
narrow histone mark
3
control
Date released
149
May, 2021
90
May, 2020
72
September, 2018
58
August, 2017
55
June, 2019
48
July, 2018
43
April, 2018
31
October, 2019
18
July, 2019
9
November, 2017
6
November, 2020
5
December, 2019
5
May, 2019
5
September, 2017
4
August, 2021
3
August, 2018
3
February, 2021
3
June, 2018
2
October, 2018
0
August, 2020
Available data
37
bam
35
bigWig
23
bed narrowPeak
14
bigBed narrowPeak
7
fastq
6
tsv
5
bed broadPeak
5
bigBed broadPeak
3
bed bed3+
1
hic
1
tar
Organism
37
Homo sapiens
Biosample type
186
tissue
37
primary cell
29
cell line
4
in vitro differentiated cells
Organ
30
epithelium
20
blood vessel
20
vasculature
20
vein
9
kidney
6
connective tissue
1
liver
Project
37
AMP
Genome assembly (visualization)
31
hg19
28
GRCh38
Lab
37
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
BIOSAMPLE
ASSAY
37 results
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ChIP-seq
total RNA-seq
ATAC-seq
DNase-seq
FAIRE-seq
primary cell
endothelial cell of umbilical vein
17
2
1
epithelial cell of proximal tubule
7
osteoblast
4
1
1
Heart fetal (cardiac muscle cell)
1
Liver fetal (hepatocyte)
1
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