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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
ChIP-seq
26
total RNA-seq
14
ATAC-seq
3
single cell RNA-seq
Assay category
32
DNA binding
29
Transcription
14
DNA accessibility
Target of assay
32
histone
32
histone modification
17
broad histone mark
15
narrow histone mark
Date released
149
May, 2021
90
May, 2020
72
September, 2018
58
August, 2017
55
June, 2019
48
July, 2018
43
April, 2018
18
July, 2019
11
October, 2019
9
November, 2017
6
November, 2020
5
December, 2019
5
May, 2019
5
September, 2017
4
August, 2021
3
August, 2018
3
February, 2021
3
June, 2018
2
October, 2018
Available data
76
fastq
75
bam
75
bigWig
46
bed narrowPeak
29
tsv
14
bigBed narrowPeak
1
csv
Organism
75
Homo sapiens
Biosample type
75
primary cell
Organ
73
pancreas
62
epithelium
Project
75
AMP
Genome assembly (visualization)
75
GRCh38
75
hg19
Lab
75
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
32
missing controlled_by
organ_slims!
vein
BIOSAMPLE
ASSAY
75 results
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ChIP-seq
total RNA-seq
ATAC-seq
single cell RNA-seq
primary cell
pancreatic ductal cell
13
4
4
1
pancreatic beta cell
10
4
pancreatic acinar cell
8
2
3
pancreatic alpha cell
10
3
pancreatic endocrine cell
11
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