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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
ChIP-seq
5
DNase-seq
3
single cell RNA-seq
Assay category
6
DNA binding
5
DNA accessibility
3
Transcription
Target of assay
6
control
RNA binding protein
3
histone
3
histone modification
3
narrow histone mark
3
transcription factor
Date released
6
November, 2017
5
June, 2019
3
July, 2019
Available data
17
bigWig
14
bam
8
bed bed3+
8
bed broadPeak
8
bed narrowPeak
8
bigBed broadPeak
8
bigBed narrowPeak
6
fastq
3
hdf5
3
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
14
Homo sapiens
Biosample type
226
tissue
14
primary cell
Organ
237
epithelium
194
pancreas
35
connective tissue
30
vasculature
29
kidney
26
blood vessel
20
vein
14
brain
13
musculature of body
12
liver
11
heart
3
eye
2
adipose tissue
2
artery
1
pericardium
Project
14
AMP
Genome assembly (visualization)
14
hg19
11
GRCh38
Lab
14
AMP-T2D consortium
organ_slims!
embryo
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
14 results
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ChIP-seq
DNase-seq
single cell RNA-seq
primary cell
astrocyte of the cerebellum
2
1
brain microvascular endothelial cell
2
1
choroid plexus epithelial cell
2
1
cerebellar granule cell
2
Purkinje cell
1
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