Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
475
accessible chromatin
363
target gene predictions
354
candidate regulatory elements
208
histone modifications
98
binding sites
76
variant allelic effects
11
caQTL
10
chromatin state
5
eQTL
3
hQTL
2
meQTL
1
other
Date released
330
November, 2021
326
February, 2021
311
September, 2022
178
May, 2021
103
February, 2024
81
May, 2020
56
January, 2021
49
June, 2020
39
May, 2024
30
October, 2022
23
January, 2020
19
April, 2020
16
August, 2021
13
May, 2022
9
November, 2022
7
October, 2019
6
August, 2017
4
February, 2023
2
January, 2022
2
November, 2020
1
June, 2021
1
March, 2020
Available data
1602
bed bed3+
591
tsv
407
bigWig
156
bed bed9
108
txt
27
bed bed9+
16
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1561
Homo sapiens
Biosample type
2123
cell line
1804
tissue
1606
primary cell
348
in vitro differentiated cells
4
stem cell
Organ
457
epithelium
217
connective tissue
109
vasculature
83
skin of body
73
blood vessel
70
pancreas
52
kidney
42
musculature of body
40
liver
39
mammary gland
35
penis
extraembryonic component
31
brain
30
lung
26
heart
23
intestine
20
artery
20
eye
18
embryo
17
vein
14
bronchus
13
lymphatic vessel
12
bone element
11
adrenal gland
11
bone marrow
11
stomach
9
blood
9
bodily fluid
9
esophagus
9
placenta
8
prostate gland
6
large intestine
5
trachea
5
uterus
4
small intestine
3
gonad
3
mouth
3
spinal cord
3
thyroid gland
2
ovary
1
limb
1
thymus
Project
1198
AMP
330
ENCODE
59
T1D
19
LungMap
Genome assembly (visualization)
1600
hg19
539
GRCh38
organ_slims!
extraembryonic component
BIOSAMPLE
TYPE
1606 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
histone modifications
binding sites
variant allelic effects
caQTL
chromatin state
eQTL
hQTL
meQTL
other
primary cell
monocyte
18
2
86
1
1
1
CD8-positive, alpha-beta T cell
4
5
7
30
common myeloid progenitor, CD34-positive
14
27
B cell
6
10
17
endothelial cell
15
7
3
1
2
2
2
1
+ See 321 more…
See all biosamples
Download