Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
473
accessible chromatin
366
target gene predictions
318
candidate regulatory elements
209
histone modifications
98
binding sites
74
variant allelic effects
11
caQTL
6
chromatin state
5
eQTL
3
hQTL
2
meQTL
1
other
Date released
329
November, 2021
327
February, 2021
317
September, 2022
178
May, 2021
102
February, 2024
80
May, 2020
56
January, 2021
50
June, 2020
30
October, 2022
20
January, 2020
19
April, 2020
16
August, 2021
13
May, 2022
9
November, 2022
6
August, 2017
5
October, 2019
4
February, 2023
2
January, 2022
2
November, 2020
June, 2021
1
March, 2020
Available data
1566
bed bed3+
591
tsv
404
bigWig
159
bed bed9
108
txt
27
bed bed9+
15
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1521
Homo sapiens
Biosample type
2072
cell line
1776
tissue
1566
primary cell
341
in vitro differentiated cells
4
stem cell
Organ
445
epithelium
207
connective tissue
104
vasculature
83
skin of body
71
blood vessel
69
pancreas
52
kidney
41
musculature of body
39
mammary gland
38
liver
35
penis
32
extraembryonic component
31
brain
30
lung
24
heart
23
intestine
20
artery
eye
18
embryo
15
vein
14
bronchus
12
bone element
11
adrenal gland
11
bone marrow
11
stomach
10
lymphatic vessel
9
blood
9
bodily fluid
9
esophagus
9
placenta
prostate gland
6
large intestine
5
trachea
5
uterus
4
small intestine
3
gonad
3
mouth
3
spinal cord
3
thyroid gland
2
ovary
1
limb
1
thymus
Project
1159
AMP
329
ENCODE
59
T1D
19
LungMap
Genome assembly (visualization)
1560
hg19
494
GRCh38
month_released!
June, 2021
organ_slims!
eye
prostate gland
BIOSAMPLE
TYPE
1566 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
histone modifications
binding sites
variant allelic effects
caQTL
chromatin state
eQTL
hQTL
meQTL
other
primary cell
monocyte
18
2
86
1
1
1
CD8-positive, alpha-beta T cell
4
5
7
30
common myeloid progenitor, CD34-positive
14
27
B cell
6
10
14
endothelial cell
15
7
1
2
2
2
1
+ See 321 more…
See all biosamples
Download