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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
DNase-seq
1
Hi-C
1
pCHi-C
Assay category
6
DNA accessibility
1
3D chromatin structure
Date released
5
June, 2019
1
February, 2021
1
July, 2019
1
November, 2020
Available data
36
bam
32
bigWig
17
bed narrowPeak
15
bigBed narrowPeak
15
tsv
8
bed bed3+
6
bed broadPeak
6
bigBed broadPeak
3
fastq
1
bed bed3
1
bed bedMethyl
1
bigBed bedMethyl
1
hdf5
Organism
8
Homo sapiens
Biosample type
13
in vitro differentiated cells
8
primary cell
6
tissue
Organ
21
epithelium
10
kidney
8
brain
8
connective tissue
8
vasculature
6
blood vessel
6
liver
3
heart
2
vein
1
eye
1
musculature of body
0
blood
Project
8
AMP
Genome assembly (visualization)
7
hg19
6
GRCh38
Lab
8
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
artery
BIOSAMPLE
ASSAY
8 results
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DNase-seq
Hi-C
pCHi-C
primary cell
cardiac fibroblast
3
brain pericyte
1
1
osteoblast
1
1
hepatic stellate cell
1
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