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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 28DNase-seq
  • 21ChIP-seq
Assay category
  • 28DNA accessibility
  • 21DNA binding
Target of assay
  • 16histone
  • 16histone modification
  • 8broad histone mark
  • 8narrow histone mark
  • 5RNA binding protein
  • 5transcription factor
  • 1chromatin remodeller
Date released
  • 24June, 2019
  • 14August, 2017
  • 6November, 2017
  • 4October, 2019
  • 1November, 2020
Available data
  • 613bigWig
  • 609bam
  • 409fastq
  • 295bed narrowPeak
  • 270tsv
  • 153zippedFastqFolder
  • 109bigBed narrowPeak
  • 100tagAlign
  • 49bed broadPeak
  • 49bigBed broadPeak
  • 37bed bed3+
  • 10bed bedMethyl
  • 10bigBed bedMethyl
  • 6hic
  • 4bedpe bed3+
  • 4hdf5
  • 3cool
  • 2csv
  • 1bed bed3
  • 1tar
Organism
  • 49Homo sapiens
Biosample type
  • 213tissue
  • 59cell line
  • 49primary cell
  • 1in vitro differentiated cells
Organ
  • 22epithelium
  • 12vasculature
  • 11brain
  • 10kidney
  • 8blood vessel
  • 6connective tissue
  • 4vein
  • 3heart
  • 2liver
  • 1eye
  • 1musculature of body
Project
  • 49AMP
Genome assembly (visualization)
  • 45GRCh38
  • 42hg19
Lab
  • 49AMP-T2D consortium
Audit category:
  • 3inconsistent ontology term
Audit category:
  • 1inconsistent assembly
BIOSAMPLE
ASSAY

49 results

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Clear Filters
DNase-seq
ChIP-seq
primary cell
skeletal muscle myoblast113
endothelial cell of umbilical vein22
astrocyte of the cerebellum12
brain microvascular endothelial cell12
cardiac fibroblast3
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