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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
5
DNase-seq
1
FAIRE-seq
Assay category
14
DNA binding
6
DNA accessibility
Target of assay
12
histone
12
histone modification
7
narrow histone mark
5
broad histone mark
2
RNA binding protein
2
transcription factor
Date released
13
October, 2019
5
June, 2019
2
November, 2017
Available data
31
bam
27
bigWig
20
bed narrowPeak
20
bigBed narrowPeak
9
bed broadPeak
9
bigBed broadPeak
7
bed bed3+
3
fastq
2
hdf5
2
hic
2
tsv
1
bed bedMethyl
1
bedpe bed3+
1
bigBed bedMethyl
1
tar
Organism
20
Homo sapiens
Biosample type
130
tissue
20
primary cell
12
cell line
Organ
106
epithelium
68
pancreas
22
kidney
21
vasculature
17
blood vessel
17
connective tissue
13
vein
11
brain
9
musculature of body
6
heart
6
liver
3
eye
Project
20
AMP
Genome assembly (visualization)
19
GRCh38
19
hg19
Lab
20
AMP-T2D consortium
BIOSAMPLE
ASSAY
20 results
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ChIP-seq
DNase-seq
FAIRE-seq
primary cell
endothelial cell of umbilical vein
10
2
1
brain microvascular endothelial cell
2
1
retinal pigment epithelial cell
2
1
kidney capillary endothelial cell
1
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