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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
DNase-seq
5
ChIP-seq
Assay category
7
DNA accessibility
5
DNA binding
Target of assay
5
histone
5
histone modification
3
RNA binding protein
3
narrow histone mark
transcription factor
2
broad histone mark
Date released
5
June, 2019
4
October, 2019
3
November, 2017
Available data
34
bam
32
bigWig
21
bed narrowPeak
21
bigBed narrowPeak
12
bed broadPeak
12
bigBed broadPeak
10
bed bed3+
6
fastq
3
hdf5
3
tsv
2
hic
1
bed bedMethyl
1
bedpe bed3+
1
bigBed bedMethyl
1
tar
Organism
12
Homo sapiens
Biosample type
27
tissue
12
primary cell
Organ
20
epithelium
10
kidney
10
vasculature
8
brain
7
blood vessel
6
connective tissue
4
vein
3
heart
2
liver
1
eye
1
musculature of body
Project
12
AMP
Genome assembly (visualization)
12
hg19
10
GRCh38
Lab
12
AMP-T2D consortium
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
12 results
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DNase-seq
ChIP-seq
primary cell
endothelial cell of umbilical vein
2
2
astrocyte of the cerebellum
1
1
brain microvascular endothelial cell
1
1
choroid plexus epithelial cell
1
1
astrocyte of the hippocampus
1
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