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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
DNase-seq
14
ChIP-seq
Assay category
19
DNA accessibility
14
DNA binding
Target of assay
11
histone
11
histone modification
7
narrow histone mark
4
broad histone mark
3
RNA binding protein
3
transcription factor
Date released
33
June, 2019
19
August, 2017
14
September, 2018
13
October, 2019
6
November, 2017
5
September, 2017
4
May, 2019
Available data
33
bam
33
bed narrowPeak
33
bigBed narrowPeak
33
bigWig
19
bed bed3+
19
bed broadPeak
19
bigBed broadPeak
Organism
33
Homo sapiens
Biosample type
162
tissue
33
primary cell
Organ
18
epithelium
connective tissue
12
kidney
9
musculature of body
6
heart
5
brain
4
vasculature
3
eye
2
blood vessel
2
liver
Project
33
AMP
Genome assembly (visualization)
33
GRCh38
27
hg19
Lab
33
AMP-T2D consortium
Audit category:
11
inconsistent ontology term
organ_slims!
connective tissue
target.investigated_as!
control
BIOSAMPLE
ASSAY
33 results
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DNase-seq
ChIP-seq
primary cell
skeletal muscle satellite cell
7
cardiac muscle cell
1
2
epithelial cell of proximal tubule
1
2
retinal pigment epithelial cell
1
2
glomerular visceral epithelial cell
2
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