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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 6Hi-C
Assay category
  • 63D chromatin structure
Date released
  • 3October, 2022
  • 1March, 2020
  • 1March, 2023
  • 1October, 2019
Available data
  • 613bigWig
  • 609bam
  • 409fastq
  • 295bed narrowPeak
  • 270tsv
  • 153zippedFastqFolder
  • 109bigBed narrowPeak
  • 100tagAlign
  • 49bed broadPeak
  • 49bigBed broadPeak
  • 37bed bed3+
  • 10bed bedMethyl
  • 10bigBed bedMethyl
  • 6hic
  • 4bedpe bed3+
  • 4hdf5
  • 3cool
  • 2csv
  • 1bed bed3
  • 1tar
Organism
  • 6Homo sapiens
Biosample type
  • 11tissue
  • 6primary cell
  • 4in vitro differentiated cells
  • 2cell line
Organ
  • 5epithelium
  • 3pancreas
  • 2blood vessel
  • 2vasculature
  • 2vein
Project
  • 3HPAP
  • 2AMP
  • 1ITG
Genome assembly (visualization)
  • 5hg19
  • 1GRCh38
Lab
  • 3Klaus Kaestner, Upenn
  • 2AMP-T2D consortium
  • 1ITG
Audit category:
  • 4audit script error
BIOSAMPLE
ASSAY

6 results

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Hi-C
primary cell
endothelial cell of umbilical vein2
chondrocytes1
pancreatic acinar cell1
pancreatic alpha cell1
pancreatic beta cell1
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