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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ATAC-seq
6
WGBS
Assay category
12
DNA accessibility
6
DNA methylation
Date released
12
February, 2023
6
February, 2021
Available data
610
bigWig
bam
409
fastq
292
bed narrowPeak
270
tsv
153
zippedFastqFolder
109
bigBed narrowPeak
96
tagAlign
49
bed broadPeak
49
bigBed broadPeak
34
bed bed3+
10
bed bedMethyl
10
bigBed bedMethyl
6
hic
4
bedpe bed3+
4
hdf5
3
cool
2
csv
1
bed bed3
1
tar
Organism
18
Homo sapiens
Biosample type
60
tissue
18
primary cell
6
cell line
4
in vitro differentiated cells
4
stem cell
Organ
6
epithelium
6
pancreas
Project
12
AMP
6
HPAP
Lab
12
AMP-T2D consortium
6
Klaus Kaestner, Upenn
Audit category:
6
inconsistent ontology term
files.file_type!
bam
month_released!
August, 2021
BIOSAMPLE
ASSAY
18 results
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ATAC-seq
WGBS
primary cell
pancreatic alpha cell
6
gabaergic neuron
3
glutamatergic neuron
3
microglial cell/astrocyte
3
oligodendrocyte
3
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