Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 35ChIP-seq
  • 1DNase-seq
  • 1RRBS
Assay category
  • 35DNA binding
  • 1DNA accessibility
  • 1DNA methylation
Target of assay
  • 22histone
  • 22histone modification
  • 13control
  • 11broad histone mark
  • 11narrow histone mark
Date released
  • 37August, 2017
Available data
  • 37fastq
  • 36bam
  • 24bigWig
  • 23bed narrowPeak
  • 9bed broadPeak
  • 9bigBed broadPeak
  • 9bigBed narrowPeak
  • 9tagAlign
  • 1bed bedMethyl
  • 1bigBed bedMethyl
Organism
  • 37Homo sapiens
Biosample type
  • 62cell line
  • 37primary cell
  • 33in vitro differentiated cells
  • 10tissue
Organ
  • 26epithelium
  • 26pancreas
Project
  • 37AMP
Genome assembly (visualization)
  • 25hg19
  • 22GRCh38
Lab
  • 37AMP-T2D consortium
Audit category:
  • 4inconsistent control read length
BIOSAMPLE
ASSAY

37 results

search-icontable-tab-icon
Clear Filters
ChIP-seq
DNase-seq
RRBS
primary cell
pancreatic alpha cell13
pancreatic beta cell13
skeletal muscle myoblast911
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego