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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 10ATAC-seq
  • 1ChIP-seq
  • 1single cell RNA-seq
Assay category
  • 10DNA accessibility
  • 1DNA binding
  • 1Transcription
Target of assay
  • 1histone
  • 1histone modification
  • 1narrow histone mark
Date released
  • 7August, 2020
  • 4September, 2020
  • 1August, 2017
Available data
  • 11bigWig
  • 11fastq
  • 1bam
  • 1bed narrowPeak
  • 1bigBed narrowPeak
  • 1zippedFastqFolder
Organism
  • 12Homo sapiens
Biosample type
  • 98cell line
  • 48tissue
  • 46in vitro differentiated cells
  • 12primary cell
Organ
  • 10epithelium
  • 10pancreas
Project
  • 11HPAP
  • 1AMP
Genome assembly (visualization)
  • 11GRCh38
  • 1hg19
Lab
  • 11Klaus Kaestner, Upenn
  • 1AMP-T2D consortium
Audit category:
  • 1inconsistent assembly
  • 1inconsistent control read length
  • 1inconsistent control run_type
BIOSAMPLE
ASSAY

12 results

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ATAC-seq
ChIP-seq
single cell RNA-seq
primary cell
pancreatic alpha cell7
pancreatic beta cell3
Langerhans cell1
skeletal muscle myoblast1
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