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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
85
ChIP-seq
Assay category
85
DNA binding
Target of assay
85
histone
85
histone modification
43
narrow histone mark
42
broad histone mark
19
control
8
RNA binding protein
8
transcription factor
Date released
August, 2017
32
September, 2018
21
October, 2019
19
June, 2019
4
May, 2021
3
August, 2021
3
May, 2019
3
November, 2017
Available data
81
bam
78
bigWig
76
bed narrowPeak
35
bigBed narrowPeak
35
fastq
5
bed broadPeak
5
bigBed broadPeak
3
bed bed3+
3
tagAlign
Organism
85
Homo sapiens
Biosample type
504
tissue
85
primary cell
55
in vitro differentiated cells
38
cell line
2
stem cell
Organ
52
epithelium
32
pancreas
17
vasculature
16
blood vessel
15
vein
10
kidney
8
connective tissue
8
musculature of body
3
brain
3
liver
2
heart
1
eye
Project
85
AMP
Genome assembly (visualization)
78
hg19
76
GRCh38
Lab
Kyle Gaulton, UCSD
85
AMP-T2D consortium
Audit category:
17
inconsistent ontology term
Audit category:
32
missing controlled_by
lab.title!
Kyle Gaulton, UCSD
month_released!
August, 2017
BIOSAMPLE
ASSAY
85 results
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ChIP-seq
primary cell
endothelial cell of umbilical vein
15
pancreatic ductal cell
13
pancreatic endocrine cell
11
pancreatic acinar cell
8
epithelial cell of proximal tubule
7
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