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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
ChIP-seq
3
total RNA-seq
1
DNase-seq
1
RRBS
1
small RNA-seq
Assay category
10
DNA binding
4
Transcription
1
DNA accessibility
1
DNA methylation
Target of assay
8
histone
8
histone modification
4
broad histone mark
4
narrow histone mark
2
control
Date released
11
June, 2019
5
July, 2019
Available data
15
bam
13
bigWig
9
bed narrowPeak
9
bigBed narrowPeak
4
tsv
1
bed bed3+
1
bed bedMethyl
1
bed broadPeak
1
bigBed bedMethyl
1
bigBed broadPeak
Organism
16
Homo sapiens
Biosample type
155
tissue
66
cell line
16
primary cell
Organ
254
epithelium
194
pancreas
38
connective tissue
37
vasculature
36
kidney
31
blood vessel
22
vein
21
brain
14
liver
14
musculature of body
13
heart
5
eye
2
adipose tissue
2
artery
1
pericardium
Project
16
AMP
Genome assembly (visualization)
14
hg19
13
GRCh38
Lab
16
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
BIOSAMPLE
ASSAY
16 results
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ChIP-seq
total RNA-seq
DNase-seq
RRBS
small RNA-seq
primary cell
skeletal muscle satellite cell
8
1
1
skeletal muscle cell
2
1
1
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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