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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 117ChIP-seq
  • 98total RNA-seq
  • 16pCHi-C
  • 8snATAC-seq
Assay category
  • 117DNA binding
  • 98Transcription
  • 8DNA accessibility
Target of assay
  • 114histone
  • 114histone modification
  • 64broad histone mark
  • 50narrow histone mark
  • 3control
Date released
  • 186May, 2021
  • 45May, 2020
  • 8January, 2021
Available data
  • 215bigWig
  • 180bam
  • 114bed narrowPeak
  • 96tsv
  • 84tagAlign
  • 2bed bed3+
Organism
  • 239Homo sapiens
Biosample type
  • 239primary cell
  • 52tissue
  • 47in vitro differentiated cells
  • 5cell line
Organ
  • 8blood
  • 8bodily fluid
  • 1bone element
  • 1bone marrow
  • 1connective tissue
Project
  • 204T1D
  • 35AMP
Genome assembly (visualization)
  • 215hg19
  • 180GRCh38
Lab
  • 524AMP-T2D consortium
  • 324Klaus Kaestner, Upenn
  • 239Kyle Gaulton, UCSD
  • 1ITG
Audit category:
  • 5inconsistent ontology term
BIOSAMPLE
ASSAY

239 results

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Clear Filters
ChIP-seq
total RNA-seq
pCHi-C
snATAC-seq
primary cell
monocyte84531
CD8-positive, alpha-beta T cell3341
peripheral blood mononuclear cell8
B cell21
naive B cel21
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